cytoscape-expand-collapse demo
General
Import from GraphML file
Save as JSON
Load from JSON
Nodes
Add compound for selected
Remove selected compound
Expand all and remove
Load compouds collapsed
Collapse all nodes
Expand all nodes
Collapse selected recursively
Expand selected recursively
Apply Markov clustering
Clustering depth:
Apply Markov clustering on load
Edges
Collapse all edges
Expand all edges
Collapse selected edges
Expand selected edges
Collapse edges between selected nodes
Expand edges between selected nodes
Group edges of similar type
Allow nested edge collapse